Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSILLTRPLSDSLNT---RSTLKKYGYKVYIEPAFTIK-----HLQPDI-SAYKFDVVISTSKNSVKAFSQICR---------------VDDLPIITVGNSTMQTAKDSGFSDIISADSNVEGLISFVKNYYSRAVKFLYIRGQEVSCDLKKRLSEEGFNVREVILYKTIIKRGLTNRCKNLLLGGRINSVAFFSSQTARIFCSLVLKSGLSNVMDNITAYAMSKNIVDSLKPIKWKKIITSRLPTQENLIDIINKDC- |
| 1JR2 Chain:A ((1-260)) | MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVSCTAESPTPQALATGIRKALQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141637 for 1812 contacts (-78.2/contact) +
2D Compatibility (PS) -25281 + (NN) -4464 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -181632.0 ( -100.24 by residue)
QMean score : 0.573
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