Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRLLCEIEYEVRGMENIPKYPFVIASKHQSPLETFIFILLFRNAVFILKRELKWIPFIGLHLMALRMIFINRSDGINAMRHIIKLARMRIAENRSIIIFPEGTRTAAKQKTKYQPGIAALYSVLSVPVL-------PVALNTGLFWPKSILSMRRNPGKAVIEILPPIYHGLNKNEFLKNLEKTIEERSNKLTAEKN |
1V98 Chain:A ((81-135)) | ------------------------------------------------------------------------------------------------------GRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGAS-PRRVLEERLRPYLEGR----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7310 for 223 contacts (-32.8/contact) +
2D Compatibility (PS) -4992 + (NN) -301 + (LL) 12848
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -755.0 ( -3.39 by residue)
QMean score : 0.295
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