Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARTVNVLLPLPIDQLFSYAVKENTDVSVGDYVVVPFGKKRLIGIVWKYSNKND---QELKFIEQKINL-PNIRLKLIAFAEWVAQYNVISIGMLAKVIMGGVLKVNHLDKLVHVEQEQEVSEINYQLNPEQQIASNKIISNLNEYSVTLLDGETGSGKTEVYLSVIAQ-LIKNYSSTPATPNAARTLSFQCPDTQLYKHCNLGPPVGYHPSTLILGSSFPRNLIKNVHFNVRAATPIPSLQTKFLDSSVSYLHDIFMFKAKPTIIFNTLSSPSAGMTPKYVETASN--KGSIQVLILLPEIVLTSQLVNRIRSQTSRNLAEWHSGLTLKTRRNNWLNTANGNAQIIIGARSALFLPYKNLKLIIVDEEHDSSFKQEQGTIYNARDMAIILAKIENIPIILSSATPLLETIYHVKNGNYNYVKLAKRFGGAELPLIKVVDTRNNKQWISNELFEGIKQTIEKKQQVMLFLNRRGYAQLAVCKKCGYKIPCSNCAVWLVYHKKKNALLCHHCSYQLKLPEKCSNCQSKQSLFLYGIGIERLLEETVKLIPNAKTAIISSDQKSVSNVIDLVLKEELNIIIGTQIIAKGHNFPKLTLVGVINADLSLENADLRAAEKTYQLLHQVAGRSGRFNEKGMVIVQTNHPESSVIKALQHQKRDSFYEIELESRYKAKMPPFSRLIALIICGKNQIATQKAANEIASFLHNQCLSKKLPSSSSLSFQCLTLKSRKKEFEILGPSPAAISFLNNKYRYRVLLKIYNKHSLSVQKKLKYWIKNCNLSPNIIV---TIDVDPISFF |
| 4NL4 Chain:H ((18-747)) | --SVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQERIGIVAAVSERSELPLDELKPVAEALDDEPVFSTTVWRLLMWAAEYYHHPIGDVLFHALPVMLR---------------------QGKPASATPLWYWFAT-EQGQVVDLNGLKRSRKQQQALAALRQGKIWRHQVGELEFNEAALQALRGKGLAELACEATDWRSAYSVAG------------ERLRLNTEQATAVGAIHSAADRFSAWLLAGI----------------TGSGKTEVYLSVLENVLAQGRQALVMVPEIGLTPQTIARFRQRFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSSLFTPFKDLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQIPIILGSATPALETLHNVRQGKYRQLTLSKPAQQHVLDLKG----QPLQAGLSPALISRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDSYYTLHQAQHHLRCHHCDSQRPIPRQCPSCGSTH-LVPVGIGTEQLEQALAPLFPEVPISRIDRHLAAVH-------RGGARILIGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHHPEHPLLQTLLYKGYDAFAEQALAERQTMQLPPWTSHVLIRAEDHNNQQAPLFLQQLRNLLQASPLADE-------------------KLWVLGPVPA--------LRWQILLQHPS------RVRLQHIVSGTLALINTLPEAWVLDVDPIEG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -326941 for 5531 contacts (-59.1/contact) +
2D Compatibility (PS) -74732 + (NN) -31927 + (LL) 7744
1D Compatibility (HY) -34000 + (ID) 11100
Total energy: -470956.0 ( -85.15 by residue)
QMean score : 0.429
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