Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPIQISEPNSNEVVFGIDLGTTNSLIAVVNKAGNVEIFTDEQGRELLPSVISY--ENNTL------KTGYDVDQNAIYPIKRLMGKSVEDLNKEGINLEIDNESEKIIRVKCSE------DKYLTPIEISAEILKALCERVKKSTGMEVRKAVITVPAYFDDSARNATKYAAKLAGIEVLRLINEPTAAALSYSIAKNNNSGIYAVYDLGGGTFDISILKLHQ----GVFQVLAVGGDTKLGGDDFDHLLSMIILDKYRKKVGKDLNSLKHLSTKSRSIKEHLSKNISSTFEFNIN----------GELFKCKITKEEFEQTISSLVNKTINIVTHTISNIDLKIEDIEGVILVGGATRVPLVQSSLVKLFGNKVLNDVDPDKAVAIGAALQAHYLTSNSKDRNVLLDVLPLSLGIETMGGIVEKIIPRNTPLPVSETREFTTYIDGQTAIKIHVCQGEREIIEDNKSLAQFELKGIPQLPAGSARVEIEFIVNVDGILTVTAREKTTGIEQTVEINSSFGLSEADIQDMVNQSINNFDEDMKARSLAEAKINGNKLIH-----LVESNDNLSTDKN--LKNLLQNTKNALQGNDLNEINNAITELESFSLELCESTNK |
2KHO Chain:A ((4-600)) | --------------IIGIDLGTTNSCVAIMD-GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQD---EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDV-LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226658 for 4373 contacts (-51.8/contact) +
2D Compatibility (PS) -60734 + (NN) -21461 + (LL) 856
1D Compatibility (HY) -37200 + (ID) 11500
Total energy: -356697.0 ( -81.57 by residue)
QMean score : 0.589
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