Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLSQEANSNSVEAQKLQQVDNITPSSEGLLQQMQSLEKRIKSLEVTNRVILGLFIGTLATAMTVGAGFAIAAAPIIAGSIVGGVLATVALVALGATVYRCRAQVEAGFRYAAEKTIKGVKYIGEKIKDSAIHTKDSVKEAVSSIGQVAREETSSVLKTMGHKLSGLGASMSNLDSIPYSIGLQDSMVVSKTEEKTKNFNSIKEMFV--KEVFEDKAIDSSVLVKKIFSELKGKVLEKAYSVDGQQGFKKDQLINQLGQQADFVSKLSSKKLQ--NLLAQGDNNLYEIFSEHHDEIKRIVKEHKTEHNFSESLNRMAKRHDENRKDSTQSSLPRSNSLSSVRTDSTVNSVAELLNSEGHRKVRSSSKLLRWLPWNKVSKAPEEAANVKYQVLPESDILAREIGKRTFYGIPVPAEGVDKTVTVNPNLFRSNSPNSLYGSPVLTPAVLLQVPKSLSLGSLSSDSGMDSGPSTLEKQSLSPEDLAKARASLKNTGSLGKLVEQQPSASPPAVEDVSEDLEEDFKKDKPATTFSQLKAEKSGAEVSYL |
4L6Y Chain:A ((19-146)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------LQKALNHLREIWELIGIPEDQRLQRTEVVKKHIKELLDMMIAEEESLKERLIKSISVCQKELNTLCSELHVEPFQEEGETTIL--QLEKDLRTQVELMRKQKKERKQELKLLQEQDQELCEILCMPHYDIDSASVPSLEELNQFRQHVTTLRETKASRREEFVSIKRQIILCMEELDHTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLRTQIRELWDRLQIPEEEREAVATIMSGSKAKVRKALQLEVDRLEELKMQNMKKVIEAIRVELVQYWDQCFYSQEQRQAFAPFCAEYTESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRRGGNLLKEEKQRAKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3343 for 587 contacts (5.7/contact) +
2D Compatibility (PS) -12703 + (NN) -2787 + (LL) 13360
1D Compatibility (HY) -8400 + (ID) 1450
Total energy: -8637.0 ( -14.71 by residue)
QMean score : 0.273
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