Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKVLSIFACFLISFSSYANMFDWGTRKVSDTNTYVCNCNQGLADLVEELIPAVVNISSEQIIKQENNNRTKTPSFAPRNNFFDDFREFFEHFDQFFTDRNPSINREVVLLGSGFIIDKS-GTIVTNYHVIKNAQDITVTMNDNTYFKAEVLGYDARTDLAVLKIKADKDLSFVTFSNSDKARVGDTVMAIGNPFGLGG--SVSTGIISARSRDISIGTTSEFIQTDAAINRGNSGGPLFDLNGKVIGINTAIYSPSESGGNVGIGFAIPSNLAISIIDTLKSGKKIKHGWLGVQVQPITREFAESLGL-KDVKGALVANIVKDSPAEKGGIKVGDILLEFDGKKIDRMTQLPQMVSRTEPGKKVQIKLLRKGKEVNVKVVIEESVNDSKDSNTEENRSISDYITGLTVSNLPKEPKESKNDTPIKGVIVTNVDSNSNATLRGIKKGDIIIQLDGVDIENTENFQKQVDLAIKKSGKDSIMLLIYRNGNQFFTSIKLKK |
| 3PV3 Chain:D ((21-447)) | -------------------------------------------MAPVLKNIMPAIVNVAVQGYLPN----------------------------------------RKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDA-KNLKSLVIGDSDKLEVGDFVVAIGNPFGLN-SQSATFGIVSALK---------NFIQTDAAINPGNAGGALVNAKGELIGINTAILS---YGGNVGIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAV----VTDIK-SHEQKLQSNNPFLYGLALRAFEQESPPHGN---VIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQ-----TIAQEKKKELLVQVLRGPGSMYLLVI--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -210678 for 3005 contacts (-70.1/contact) +
2D Compatibility (PS) -41924 + (NN) -14386 + (LL) 4796
1D Compatibility (HY) -32800 + (ID) 7750
Total energy: -302742.0 ( -100.75 by residue)
QMean score : 0.584
|
|
|