Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFQLVTHFQPAGDQPQAIDSLVAGLNDNKRDQVLLGVTGSGKTFTMANVIARTNRPALIIAHNKTLAAQLYEEMKGFFPHNAVEYFISYYDYYQPEAYLPQTDTYIEKDSVINERIDMLRYSAVCSLLERRDTIVVASVSCIYGLGSPESYLSMTITLSTGDRIRINDFLNDLANLQYKRSDIRFERGYFRMRGDVIDIFPAY-YEDKAWRLLLIGNEIEGISEINAITGNIIKCIDKITIFPNSYHITSRETLLRAVQPIREELNERLDYYYSQNKIVEAQRLEQRTNFDIEMMVATGTCKGIENYSRYLYGMEAGDAPPTLFEYLPEDVILFVDESHVTVPQIGAMYNGNESRKKKLIDHGFRLPSAFDNRPLKFKEWESMRPQTIYISATPGKYELARTNNLFVEQVIRPTGITDPICIVKPAEAQVYDVVHEAQVTIKRGFCVLITTLTKKMAEKLAEHMSELNMKVSYLHSDISALERIDIVYKLRSKEIDVLIGVNLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNAESRAILYADKVTGSMDRALKETERRRKKQKKYSVLHNVLPKTIIKPISNTLKEKVVVKVTTIGMNKDTVSSLRKQMLAHAKNLEFEEAAKIKNIIGRINNL
2D7D Chain:A ((4-654))-RFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPEEYREMVVSLRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRD-EHCVRVEFFGDEIERIREVDALTGEILGDRDHVAIFPASHFVTRAEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYEIEHTD-EMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITKSMEIAINETKRRREQQERFNEEHGITPKTIN-----------------KKERQKVVEQMEHEMKEAAKALDFERAAELRDLL------


General information:
TITO was launched using:
RESULT:

Template: 2D7D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -330100 for 4981 contacts (-66.3/contact) +
2D Compatibility (PS) -67875 + (NN) -29641 + (LL) 1796
1D Compatibility (HY) -61600 + (ID) 17150
Total energy: -504570.0 ( -101.30 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_2D7D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D7D-query.scw
PDB file : Tito_Scwrl_2D7D.pdb: