Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDDKKTTIEEEKGILGWIEYRLPIFSFLKHTASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDHAFNSVERIMRDVNYGWLIRYTHAVGASLFFMVVYVHMMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGATVITNLFSAVPLVGNKIVMWLWGGFSVDNPTLNRFFALHYLLPFVIIALAMLHIIALHRFGSGNPSGVEV------KSGKDTIPLYPYYIVKDCITFGLFFIVLFAFVFYAPNYLGHPSNYIEADSMVTPVHIVPEWYFLPFYAMLRSI------------------PDKLTGVLTMFGSILVWFLLPWLDKAKVKSGAYRPLFKKFFLVFAVNFAFLAWLGGQEVKEPYITLSRLSTLYYFAYFMVVLPLLSKYEKPEELPKTISDSVPEMK |
2QJY Chain:A ((3-430)) | --GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -314640 for 3128 contacts (-100.6/contact) +
2D Compatibility (PS) -41688 + (NN) -22382 + (LL) 600
1D Compatibility (HY) -60800 + (ID) 11400
Total energy: -450310.0 ( -143.96 by residue)
QMean score : 0.414
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