Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIRIGTRGSSLAIAQALEAKQKL----LDLFSSLSVEIIKIKTSGDKYANANLAEIGGKGLFIKEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQAIIATSSIRRKVQLLNFRPDLNIVP-LRGNVTTR---LQNQSFDGIILAEAGLIRLKKDYLITEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCFTPLAALAKYVSENVLHLYCMLA--DKKNIYFTERTS--FVEDAEKMGMDAGLELKSKCL |
4HTG Chain:A ((12-311)) | -IIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLS--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149793 for 2431 contacts (-61.6/contact) +
2D Compatibility (PS) -31851 + (NN) -17396 + (LL) 504
1D Compatibility (HY) -20400 + (ID) 6300
Total energy: -225236.0 ( -92.65 by residue)
QMean score : 0.437
|
|
|