Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNKDLVDHDLSDEVCELLPASRHKTYVVKVGQVKIGGNNPIVVQSMALGVHIDSDNVKSSAKRYAKEIIELAHAGSELVRIALNSEEVARAVPYIVEEINKEGFDGKILVGCGQYELDKLVRNYPDNIKMLGKIRINPGNIGFGDKHDEKFERVIEYAITHDIPVRIGVNWGSLDKYLLQKLMDENSLSNNPKSSDVILRKALVMSALNSAQKAEEIGLSLDKIVISCKVSRVQDLISVYTALAKSSNYALHLGLTEAGTGNKGMISTTAGLTYLLQNGIGDTIRASLTQRPGEPRVNEVAVCQEILQSIGLRHFNPQVNSCPGCGRTNSDRFRILTEEVNDYIKIRMPTWKKKNPGVEHMNIAVMGCIVNGPGESKHANLGISLPGYGEKPISAVYKDGKYFKTLQGDNIFEEFKAIIDDYVKEHYT |
4S3B Chain:A ((5-403)) | ----------------------RRPTPTVYVGRVPIGGAHPIAVQSM---TNTPTRDVEATTA----QVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGAEVP-LVGDFHFNGHLLLRKYPKMAEALD-FRINPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNARRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQAPLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPAPGEPRTKEVEVAQEILQALGLRAFAPEVTSCPGCGRTTSTFFQELAEEVSRRLKERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLLTILKGEGIAEEFLRLVEDYVKTRFA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215953 for 3339 contacts (-64.7/contact) +
2D Compatibility (PS) -43525 + (NN) -19009 + (LL) 2224
1D Compatibility (HY) -29600 + (ID) 10100
Total energy: -315963.0 ( -94.63 by residue)
QMean score : 0.631
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