Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLKEKYSFKEVENKYNILWEDSRVYKWDGKKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPTERLVEQTYKTRA---REVGREKFIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTISKETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVCESSLNTITFSTEENEQIDIATTRPELFLACVAVFCHPEDARYAHLIGKTSVVPIIGVKVPIIADGRVKIDKGTGLVMCCTFGDELDIYWQQKHNLPMKIIIDQDGKINLDSMYDNNRSQYQGIGMTGERSTGVIKEGAISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSGVSLEILPTYQWFIKTLDQKAQVLDKVK--ECNWYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFPVWYSRRKGEEGKVILAEVEDLPVDPLKDLPKGYSKEEVVPDQDVMDTWATSAITPQLSALAVNSEFSLPDHRYNTIFPADLRSQSHEIIRTWAFYTILKAYYHANSLPWKNIMVSGWCLADDKKKMSKSKGNIITPKSILDTYGADVVRYWTAN-SRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVSINSVSETMDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYSDNSVHNRGNWPNKEELIYDKHSEEMGDKFMQILNLVRKIKADNNVSVKHLIKKLMIKANVKEDKLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY------------------------------------------------------------------- |
| 1GAX Chain:A ((1-862)) | MDLPKAYDPKSVEPKWAEKWAKNPFVANPKSGKPPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGKTRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEVETEPTPGKLYTLRYEVEGGGFIEIATVRPETVFADQAIAVHPEDERYRHLLGKRARIPLTEVWIPILADPAVEKDFGTGALKVTPAHDPLDYEIGERHGLKPVSVINLEGRME-----------------------------------------GERVPEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVK-DWNISRQLWWGHQIPAWYCE---DCQAVNVPRPERYLEDPTSCEACG--SPRLKRDEDVFDTWFSSALWP-LSTL----GWPEETEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWLEMARNFANKLYNAARFVLLSREGFQ--AKEDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEFCDWYLEAAKPALKAG------NAHTLRTLEEVLAVLLKLLHPMMPFLTSELYQALTGKEELALE-AWPEPGG--RDEEAERAFEALKQAVTAVRALKAEAGLPPAQEVRVYLEG----ETAPVEENLEVFRFLSRADLLPERPAKALVKAMPRVTARMPLEGLLDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREALSQIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GAX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -359120 for 6777 contacts (-53.0/contact) +
2D Compatibility (PS) -83338 + (NN) -24362 + (LL) 3556
1D Compatibility (HY) -34800 + (ID) 10850
Total energy: -508914.0 ( -75.09 by residue)
QMean score : 0.373
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