Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIIAGKYRGRRIATGKHLAARPTMSIVREAVFNILSSKKII-YNLNILDLFCGSGSFSFEALSRGAKHAFIVDLDYYNLQLPEKTAKDLGITDSITLICCSANALPK--PVSKCDIVFIDPPYYSNLVNSTLDGLANSGWLSDDALIILEVRKNED-FQCSKNFSVILERTYGIARIIFLSLST
2FPO Chain:A ((14-192))
-IRIIGGQWRGRKLPVPDS------TDRVRETLFNWLAP---VIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAG-NARVVNSNAMSFLAQKG-TPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREA
General information:
TITO was launched using:
RESULT:
Template:
2FPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169212 for 1367 contacts (-123.8/contact) +
2D Compatibility (PS) -18149 + (NN) -4486 + (LL) 1132
1D Compatibility (HY) -9600 + (ID) 2600
Total energy: -202915.0 ( -148.44 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_2FPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPO-query.scw
PDB file :
Tito_Scwrl_2FPO.pdb
: