Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKTKLSLLLIAVFLLNIDFLLSCPVFADGVSGTDKTEFVSRFSSAGSFSRASNPDCGAFKTAAAIAGIAIAVGAVWTGIVLIFSSSGLFTALVIVGMIAAIVGVWKAIGGLVVCEHSFVRHPVARDHDGEYKDFALLDGGYADCTNKNYQKEDEYFSCLQNKTRKNANKEDYDRKRAEREALNPNVQNNTGNYYWPKNSVQYSEYIEVCHRNPLTFGNLFKKEDFDRRGEDKYINFDVREKDTGYVDGSWSPKVDGDLDCKVLKAGQSKTIHGSTFKALRKMGRLCVELASISTLGISMTPWPQGVDMGCTELPPDPLAPMCDESKMKFKN-KGGIIITDPNPIKDLLKGNESKDYKTL-IREREEKKEIFVGYDNKGCFSSYVSEACHNQAGSKSLAPIPITSMIVQCIKESLDNLVAGKGT--PNGESFISVAQ-ERLKNTITAVLVLALILFSIKAMSGGVHSPQEMYMLIIKFALVIYFTTGNTMSHYYGELTKLSNGLSEIVLKASSESKGICNYEAKDYKNDTTNYSYLAPWDRLDCRILFYLGAPLDGIAGKIGTGDVGILAILLGAAPALLVAGSVIGIICAGGQILVALVAIFMAIMMMMVILWMCYVFILSLIALSIIIILSPLFIPMVLFQHTKGYFDGWLRELITYSLYPVMLFAFLSFMFIACDKIYFKNLHFEKEEKIKILGNEKQWFKLKSGECDKNENTLACMMQNYKWEKSNILGLFDFTYMEFGNSLIGELLKLALILFLFYHFLNILPDMAAELSGNHRAALGSGATPGKMMSKAFSVAKAIAGAVGKAHSGDAAGAAKEAQKARDDSRALASGNADDKSGRSPATVGSEAANATGEAIRGTADAAQSAASEAANSTES |
1Y0E Chain:A ((4-134)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHGLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRD--------YDHSDVFITATSKEVDELIESQCEV-IALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITRPKEITKRFVQVME------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20839 for 920 contacts (22.7/contact) +
2D Compatibility (PS) -13139 + (NN) -5026 + (LL) 47360
1D Compatibility (HY) -5200 + (ID) 2000
Total energy: 42834.0 ( 46.56 by residue)
QMean score : 0.103
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