Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MLKFRAIQSKNKSILSREVHAAE--------FIPYSCYWNSTTLITKQDWLVKFIKLSGFAFETADDEDLVIQNNIRNQMLRSISSPAFGLYFHTIRRKKNIFSDEFASQNFPNFFANHVNLKWREKHATRQSFINDLYITIIRRADTKGVEFLSHLLKKFGHVT--------SKHAWESDMRATYEDLEETTNRVMTNLRSYSPKILGVKETPNGLFCEIMEFLSRIVNCGFITNTLLPLK------------------------TEISRYLPVHRLFFGRKMIQVVTHNESKYAGIVSIKEYGNNTSAGMLDHFLQLPYEFIITQSFQFTNRQMAIAKMQIQQNRMIQSADKAISQIAEISHALDDAMSGRIVFG-------EHHLTILCIEKSPKSLDNALSFVESELSNCGVYPIREKVNLEPAFWAQVPGNFDYIVRKGTISSLNLAGFVSQHNYPTGNKF-NNHWGDAVTVFDTTS----GTPFFFNFHIRDVGHTMIIGPTGAGKTVLMNFLCAQAMKFSPRIFFFDKDRGAEIFLRALGGIYTLIEPRTKTNFNPLQLDDTP----DNRTFLMEWIKSLISVYNDKF--------TSEDITRVNDAIEGNFK--LRKEDRFLRNLVPFLGLAGSDTLAGAISMWHGNG----SHAAIFDNKEDLLDFSKARVFGFEM----ASLLKDPIAL-----GPVLIYLFHRISISLDGTPSIIVLDE--AWALIDNPVFAPKIKDWLKVLRKLNAFVVF----ATQSVEDASKSAISDTLVQQTATQIFLPNLKATSIYRNVFMLTEREYILIKHTDPSTRFFLVKQ-GINAVVARIDLKGLDDIVNVLSGRAESVILLHD---ILKEVGDDPKVWLPIFYQKVKNV------------------- |
| 2WP8 Chain:J ((12-977)) | VREHYLRSDIPCLSRSCTKCPQIVVPDAQNELPKFILSDSPLELSAPIGKHYVVLDTNVVLQAIDLLENPNCFFDVI-VPQIVLDEVRNKSYPVYTRLRTLCRDSDDHKRFIVF-------HNEFSEHTFVENDRNDRAIRKTCQWYSEHLKPYDI---NVVLVTNDESNIITKSLVQYIELLPNADDIRDSFTFPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGDQVIVELLPQSEWKAPSSIVLDSEHFDVNDNPDIENTTVISDKQRRLLAKDAMIAQRSKKIQPTAKVVYIQRRSWRQYVGQLAPSSVDPQSSS-TQNVFVILMDKCLPKVRIRTRRAAELLDKRIVISIDSWPTTHKYPLGHFVRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRIDDKTQNDELTMGMRALLKLSVKLKQKRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKNMSISLESSKALADSLDRCVDPEDPYFNTLVRIMSTRCMMAAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNKMDMICRNINRKHRNAQFAGRASIEYYVGQVMRNNESTETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDEVEYKLTFVPTNSDKPRDVYVF-DKVEVQVRSVMDPITSKRKAELLLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224661 for 6001 contacts (-37.4/contact) +
2D Compatibility (PS) -81227 + (NN) 1815 + (LL) 1104
1D Compatibility (HY) -8000 + (ID) 5600
Total energy: -316569.0 ( -52.75 by residue)
QMean score : 0.156
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