Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYQYYNRIFNILLIIVLLLSNVTYADASESMHQIGSDIVVGLLKTEKETYPHELGLFQSIYEMFNSFGVRTVFIDCNKIINLKKIQEELLSLLKQDEMLAKKLILDRIKIEIGQFIKGHKINRIFIPENYYNLHSEPFPP---------TPCCQLVTEAIVKIVDDNPTIHLLSICGGLQGIMSAKGIEVVHVENFVSDEEQRRSHLKSAPNPQQEDVTFQQIKIVPNSHLAKVVAKFLLPDKNGWFSTCFPDAHSGTVNNRPENRRKLELLGYKIAAFSNDGVIEAIEDK-HG--NIYFQSHPEALVVKSDKNLHLSNHKARQVSTLVAMAIINDFLYRA |
3FIJ Chain:A ((3-225)) | -----------------------------------LKPVIGITG------------QQRYVDAIQKVGGFPIALPIDDPS------------------------------TAVQAI--SLVDGLLLTGG-QDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDA-GKPIFAICRGMQLVNVALGGTLYQ--DISQVETKALQHLQR----VDEQLGSHTIDIEPTSELAKHHP----------NKKLVNSLHHQFIKKL--------APSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTM------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123447 for 1567 contacts (-78.8/contact) +
2D Compatibility (PS) -20008 + (NN) -3052 + (LL) 8536
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -146371.0 ( -93.41 by residue)
QMean score : 0.459
|
|
|