Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNLESLP----KHLAIIMDGNSRWANSQGRVKIDGYRKGSEVAYDIAKHCIALAIPYLTLYAFSMENWLRPKEETDCLFDLFYSILTDRDKVNFFHNYNIKLNFVGNLSLLPGKILNQIKESEEMTRKNDGLLLTVAVSYGAKQEIIHAVRNITRK------NIDCVSEDEFEKFLYTKDLPKLDLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKRYGR
1X07 Chain:A ((11-240))
----EKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDS--EVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRE-----
General information:
TITO was launched using:
RESULT:
Template:
1X07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150546 for 1716 contacts (-87.7/contact) +
2D Compatibility (PS) -23164 + (NN) -2686 + (LL) 688
1D Compatibility (HY) -14400 + (ID) 4750
Total energy: -194858.0 ( -113.55 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1X07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X07-query.scw
PDB file :
Tito_Scwrl_1X07.pdb
: