Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRLIRMSVLASGST-----------------------GNATFVEN-----EKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARK-----YQLPIYANEKTWQAIEKKDSRIP----------MDQKFIFNPYETKSIA----GFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI |
3MD7 Chain:A ((26-291)) | -RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFR---MQMIDSGV--HMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG----SVVYCTDVSAFPEQSLQYIKDADVLIIGALQYR-----------------PHPSHFSLGEALEWIEKL---SPKRAILTHMHVPLDYE-----TVMRETP-HHVEPGYDGLRFEV----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84745 for 1857 contacts (-45.6/contact) +
2D Compatibility (PS) -23018 + (NN) 294 + (LL) 3764
1D Compatibility (HY) -10800 + (ID) 2150
Total energy: -116655.0 ( -62.82 by residue)
QMean score : 0.438
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