Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQSIPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEVRIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQHIKP--------LGILHPNTSLKDQWWDERDFAVIDPDNNLISFFQQIKS
1XRK Chain:A ((5-121))
-TSAVPVLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQDQ-----------------VVPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIV-EQPWG-REFALRDPAGNCVHFVAE---
General information:
TITO was launched using:
RESULT:
Template:
1XRK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71010 for 767 contacts (-92.6/contact) +
2D Compatibility (PS) -11705 + (NN) 829 + (LL) 768
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -89768.0 ( -117.04 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_1XRK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XRK-query.scw
PDB file :
Tito_Scwrl_1XRK.pdb
: