Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELIGDKSTVQQAIHALQLIGFENVKSYRLPQT-------NIVT-SSIHSSEMTGEEHN----VLDVRNDDEWRKGHLKQAIHIPHGKLLN--EDIPFDKNDLIYVHCQSGVRSSIAVGILEYKGFTNIVNVRGGYQHLPAFLK
3TP9 Chain:A ((329-463))
IHLLAADAIAPDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHDVPRDGS--VCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYE-------
General information:
TITO was launched using:
RESULT:
Template:
3TP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56319 for 766 contacts (-73.5/contact) +
2D Compatibility (PS) -13447 + (NN) -6338 + (LL) 696
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -85608.0 ( -111.76 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3TP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TP9-query.scw
PDB file :
Tito_Scwrl_3TP9.pdb
: