Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSIYEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA
1GDT Chain:A ((1-182))-MRLFGYARVSTSQQ-SLDIQVRALKD----AGVKANRIFTDKASGSSSDRKGLDLLRMKVEEG--DVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFG-RKR----------KIDRD------AVLNMWQQGLGASHISKTMN-------IARSTVYKVINES------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80842 for 1214 contacts (-66.6/contact) +
2D Compatibility (PS) -19604 + (NN) -7013 + (LL) 19220
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -100239.0 ( -82.57 by residue)
QMean score : 0.309

(partial model without unconserved sides chains):
PDB file : Tito_1GDT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GDT-query.scw
PDB file : Tito_Scwrl_1GDT.pdb: