Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQTNPSFNPSPRYKSKKGWYKDKPPKEKGGMPTEVEIAGPIVIENKFIDPKTNTEKVIITDEDQKEIVESSDILTTQKLPSLMKYGFSINEKYTKDLGYALQQMRNQLPISYLYEGVGILETPFGPIVSLSEIYTTKEFDNKSPSDAICDNAYDLTPKGTFDNWFNMYLKEVKGSLLLELAVVFGISALVTSFLKHKHETEFAGIIFSFTGQSSTGKSTAASLAVSVAGNPTKGNETLFRNWNATRNALEGYLSNNFGIPIVFDELSSATFRDTTGLLYSITEGQGRQRSNVHGEVKTPKNWGTSVISTSEHSIFNDSAQNDGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDDKSNTGNRMFKRYAVITTSAKILGRVLATDIDIAKIRDYFIDYHGHTISERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFEN----YGLISLKDDHIEVKMIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGR-QTTKRSVKDN--------SGKKQSLVFYHLKLDVEFASILGLTKDKSLIQNWTPANDNKAAKELFKSANEGIGPSGVHEDF |
3KEA Chain:A ((27-134)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVHGHSASYYAIADNNVRLVCTLL--------NAGALKNLLENEFPLHQAATLED----TKIVKILLFSGLDDSQFDDKGNT--AL----YYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTS--FYH---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15594 for 625 contacts (-25.0/contact) +
2D Compatibility (PS) -9859 + (NN) -2566 + (LL) 28976
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -4393.0 ( -7.03 by residue)
QMean score : 0.322
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