Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFNQSDKFEQLKKKILGISFNLPEGEEFTFHDLNSRANVQCSKAVQQNVGRWFAYFVKHAPRVPFIIIGKDTHGHLVYLKTGPNPHYNSNPSKGGVR
1WRJ Chain:A ((73-114))
------------RIRVFKEVMRIKWGEVRTYKQVADAVKT---------SPRAVGTALSKNNV-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23739 for 241 contacts (-98.5/contact) +
2D Compatibility (PS) -4284 + (NN) -1940 + (LL) 2264
1D Compatibility (HY) -400 + (ID) 200
Total energy: -28299.0 ( -117.42 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_1WRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WRJ-query.scw
PDB file :
Tito_Scwrl_1WRJ.pdb
: