Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNKDIYSDDFQNALVDIILNIDKINVKEVFDDSCRAVDQDNKKDTLNRSPKDFSINISDIVRYSILCMENLSSDKIEENINMIKNHSSELNDNDMFIQEKNNFTTNFNKFCNALGINIANFKSGKSYVFKPKSLFVLYDILSNNSVYLHFFKNGINDKDIDSSNRIKENLYYFINHEITDQ-----RDYEHALTNYYLYFLVDSNIEIGIKSIIIKIFTEKGITSK--DKLQILEYYL---DEIDDLNTEIS---------TKIADAHVK--NSTNFLENEKVSINSNLAKYITHRDTRASAPKNMLLSLILNSDLVSPKDLEEKELKYPKKITKEHHDKLIKEINKALDYYNDNNTTPSDYFYITSD |
3HSR Chain:A ((13-137)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFYVSSKEIIKKYTNYLKEYDLTYTGYIVLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTR-------LQISLTEQGKAIKSPLAEISVKVFNEFNISEREASDIINNLRNFVS-------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35206 for 500 contacts (-70.4/contact) +
2D Compatibility (PS) -9761 + (NN) 1574 + (LL) 13052
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -39641.0 ( -79.28 by residue)
QMean score : 0.199
|
|
|