Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIVLFLIVFILLSLIVSRYLYSVALNVPSKIDVVFNPIEKLIYQLIGTKLEHMSGKTYIKHFLLFNGLMGGLSFVLLLIQQWLFLNPNHNLNQSVSLAFNTMASFLTNTNLQHYAGETDLSYLTQ--------MCVITFLMFTSAASGYAVCIAML-RRLTGMTDVIGNFYQDITRFIVRVLIPFALIISLFLISQGTPQTLKGNLVIETLSGVKQTIAYGPMASLESIKHLGTNGGGFLGANSSTPFENPTYWSNYAEALSMMLIPGSLVFLFGRMLKTK---LQ--IHPHAIMIFVAMFVMFIGFLVTCLYFEFAGNPVLHHLGIAGGNMEGKETRFGIGLSALFTTITTAFTTGTVNNMHDSLTPLGGMVPMVLMMLNAVFGGEGVGLMNMLIYVMLTVFICSLMIGK-------TPSYLGMKIEGKEMKLIALSFLVHPLLILVFSALAFIVPGASDALTNPQFHGVSQVLYEFTSSSANNGSGFEGLG----DNTVFWNISTGIVMLLARYIPIVLQILIVSSLVNKKTYQQHTQDVPINNLFFSSVLIIFIILLSGLTFLPDLMLGPIGEQLLLHA |
| 3PJZ Chain:A ((61-484)) | --------------------------------------------------KHELKSRDGF--------LIVVLFWTVLGSAGSLPFLIADNPNISVTDAFFESFSALTTTGATVIVGLDELPKAILFYRQFLQWFGGMGIIVLA---VAI--LPVLGIGG-------MTPRIAETAKALWYIYLSLTIACAVAFWLAG------------------MTPFD---AISHSFSTIAIGGFSTHD-ASM-GYFD-SYAINLITVVFLLISACNFTLHFAAFASGGVHPKYYWKDPEFRAFIFIQVLLFLVCF--LLLLKHHS------------YTSPYD-A---FDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGCAGSTGGGMKVIRILLLT-LQGARELKRLVHPRAVYTIKVGGSALPQRVVDAVWGFFSAYALVFVVCM-LGLIA----------TGMDELSAFSAVAATLNNLGPGLGEVALHFGDVNDKAKWVLIVSMLFGRLEIFTLLILLTPTFWR--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269579 for 3210 contacts (-84.0/contact) +
2D Compatibility (PS) -39796 + (NN) -10680 + (LL) 12728
1D Compatibility (HY) -16400 + (ID) 2750
Total energy: -326477.0 ( -101.71 by residue)
QMean score : 0.332
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