Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQLLSTESSNTGIRMIKHYATLTTTAHILNQSLDLQLNVSSIKNYLLSYHNETVSERSLADKAMDTIVQFIAENLGKFSQQTR------LANMIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKL--VSDRDRKTTKRNAKDDTGKSTSLVFYQIKIDLDYADVLGLQSQGRDNVIQKHSNPSQFKNTNLEEFMKSENTTLIVF
1D8V Chain:A ((76-236))--------------------------------------------------------------TRDVSYFFKESPPEAYNILFKGTRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNA-----QSAPSALLVLIQTTAEA-ARFKYIERHVAKYVATNFKPNLAIISLENQWSALS--KQIF---LAQNQGGKFRNPVDLIKPTGERFQVTNVDSDVVKGNIK---------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1D8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21439 for 1044 contacts (20.5/contact) +
2D Compatibility (PS) -15460 + (NN) 2676 + (LL) 8716
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: 8921.0 ( 8.55 by residue)
QMean score : 0.136

(partial model without unconserved sides chains):
PDB file : Tito_1D8V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D8V-query.scw
PDB file : Tito_Scwrl_1D8V.pdb: