Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQLLSTESSNTGIRMIKHYATLTTTAHILNQSLDLQLNVSSIKNYLLSYHNETVSERSLADKAMDTIVQFIAENLGKFSQQTR------LANMIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKL--VSDRDRKTTKRNAKDDTGKSTSLVFYQIKIDLDYADVLGLQSQGRDNVIQKHSNPSQFKNTNLEEFMKSENTTLIVF |
1D8V Chain:A ((76-236)) | --------------------------------------------------------------TRDVSYFFKESPPEAYNILFKGTRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNA-----QSAPSALLVLIQTTAEA-ARFKYIERHVAKYVATNFKPNLAIISLENQWSALS--KQIF---LAQNQGGKFRNPVDLIKPTGERFQVTNVDSDVVKGNIK--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21439 for 1044 contacts (20.5/contact) +
2D Compatibility (PS) -15460 + (NN) 2676 + (LL) 8716
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: 8921.0 ( 8.55 by residue)
QMean score : 0.136
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