Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLMEKILYQTDEFKLKPSGWYKTIPPKKDGGTEFEIMLSGPIAFTDRFIDPATRKEKVFLSDLNNIELVEKASILTALQLPSLIEYGFTINEKHIRDLGFVLQQMRSTTPLSTIYSGVGMLHTLLGPLISLDQPYFSNEITNSTSIICDNKYDLIPKGN---LSEWLQMYKEEVHGNLSLELDVLFGVS-SLVTAFLKYHNNVEFSGTIFSFTGQSSTGKSTAAMLAASVAGNPTKG-TENLFRSWNATRNALEGYLSGNYGVPIVLDELSAATFHDTTGLLYSFAEGQGRQRANINGDVKTPKN |
2YV5 Chain:A ((112-227)) | -----------------------------------------------------------------------------------------------------------------------------------------------EPVIVFNKIDLLNEEEKKELERWISIYRD--AGYDVLKVSAKTGEGIDELVDY--------LEGFICILAGPSGVGKSSILSRLTGEEL-RTQEV---------TTTGVRLIPF---GKGSFVGDTPGFS-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34764 for 639 contacts (-54.4/contact) +
2D Compatibility (PS) -10726 + (NN) -3222 + (LL) 11444
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -41168.0 ( -64.43 by residue)
QMean score : 0.279
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