Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSDFSSLLLDIIELIQSHIIIVNKNDHSLIYLNEMSESLLLYVYSVLINVTSINKLFLYEETNTVFRCITSSINENMDCIINHSPNELLMFLYDLEQRFNNFINRLNLKEPKNRHTYPTLNSVYIELNPLQLSEDTYFSSINVAELINRQSIRKNLFK |
3L4D Chain:A ((277-325)) | ----------------------------------------------------------------------------------------------------------LHLMDPRNKRHLAKLHQEIDEF-PAQLNYDNVMEEMPFAEQCARESIRRD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7737 for 252 contacts (-30.7/contact) +
2D Compatibility (PS) -4872 + (NN) 693 + (LL) 8984
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -7332.0 ( -29.10 by residue)
QMean score : 0.329
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