Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKYYTKEEVVISTLQTLASKFEDLDIDSHDNLNSF-------KARIGSTIDKLAKAPPLNKYTFTELMIIISIIYFKNLYIGRLDKPSSRKKKGGNLIFEIVYNNQMLNSSTAKL
4WOD Chain:A ((92-160))
---------------IQHPKSNFGDLKSLSFTDLNTYGNLVVSTRVRLGRTVEGFGFGPTLTKETRIELENKIS-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4WOD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9128 for 178 contacts (-51.3/contact) +
2D Compatibility (PS) -5319 + (NN) -1314 + (LL) 4044
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -14267.0 ( -80.15 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_4WOD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WOD-query.scw
PDB file :
Tito_Scwrl_4WOD.pdb
: