Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIVNIVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFGAPAYSAYIASGLTSSQVFFSTLSGSLKARKKTEFSP-QLVLYMGGGMIIGSML---GAFLANLFDATFVNTVYIIIALLALTLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVAN---------------SIVIAFISSIGAFVIKLIQGYIPLYDALFLIIGSIIFAPIGLKLSKKVPNIIQKWIISILIVFAIVQLIL |
4U4T Chain:A ((281-415)) | ------------------------------------------------------------------------SKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTDGQGGSFMAFFAVFLALF---LTAGLGSGSTFQMISVIFR--KLTMDRVKAEGGSDERAMREAATDTAAALGFISAIGA---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73496 for 714 contacts (-102.9/contact) +
2D Compatibility (PS) -11481 + (NN) -1172 + (LL) 12004
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -86345.0 ( -120.93 by residue)
QMean score : 0.185
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