Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKENFWSELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEFTNTESFCHPEGIHSVRGRLTFSEDEHPMVAHIWGDKPEQFRETSIQLAKMGFKGIDLNMGCPVANVAKKGKGSGLILRPDVAAEIIQATKAG-GLPVSVKTRLGYYEIDEWKDWLKHVFEQDIANLSIHLRTRKEMSKVDAHWELIEAIKNLRDEIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEKEPRE--------HTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL
1VHN Chain:A ((5-309))----------VK-VGLAPMAGYTDSAFRTLAFEWGA-DFAFSEMVSAKGFLM--NSQKTEELLP-QPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKN-EVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK-------RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKT-KGERKAVVEMRKFLAGYTKDLKGARRFREKVMKIEEVQILKEMFYNFIKEVE-------


General information:
TITO was launched using:
RESULT:

Template: 1VHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148638 for 2543 contacts (-58.4/contact) +
2D Compatibility (PS) -32047 + (NN) -14078 + (LL) 2300
1D Compatibility (HY) -16000 + (ID) 3850
Total energy: -212313.0 ( -83.49 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_1VHN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VHN-query.scw
PDB file : Tito_Scwrl_1VHN.pdb: