Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDMLISLVIPVFALLVIGGIIWVIIEGIVHISKKNKAIDNFLNQVNKVSETYKFATAFLFLILATAGIS--QFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPLYKQKKKKQTFKKYMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLIVAKKATNKNKEIETVDNTNITER
2ZJS Chain:Y ((77-176))
--------IMPYITAAIIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLATAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLL--------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZJS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69775 for 550 contacts (-126.9/contact) +
2D Compatibility (PS) -9036 + (NN) -839 + (LL) 8884
1D Compatibility (HY) -7600 + (ID) 1050
Total energy: -79416.0 ( -144.39 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJS-query.scw
PDB file :
Tito_Scwrl_2ZJS.pdb
: