Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLSITTQIIIVLILIEA------LIGLRFLKAYDVKRGKDKENKKNSKDFVKLKS--ILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK---
1AA7 Chain:A ((1-158))
MSLLTEVETYVLSIIP-SGPLKAEIAQRLEDVFA--GKNTDLEVLMEWLKTR-------PILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDKAVKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNRMGAVT------TEVAFGLVCATCEQIADSQ
General information:
TITO was launched using:
RESULT:
Template:
1AA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68916 for 1121 contacts (-61.5/contact) +
2D Compatibility (PS) -14859 + (NN) -2506 + (LL) 2208
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -91423.0 ( -81.55 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1AA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AA7-query.scw
PDB file :
Tito_Scwrl_1AA7.pdb
: