Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLKPKYQIVIAG--LCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVIAFLGAIVVTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNE-T-DLQGLLFWLSGSVSLRNIWDIPWI-IPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL |
| 2NQ2 Chain:A ((6-330)) | ------YPKILFGLTLLLVITAVISLGIGRYSLSVPQI--------DPVQ-QQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGFS--LYGLFTSTILFGFGTLALVFLF-SFK----SLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSN-WEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSL-SDAEIPISILTALIGAPLFGVLVYKL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -382079 for 2495 contacts (-153.1/contact) +
2D Compatibility (PS) -31961 + (NN) -17194 + (LL) 2780
1D Compatibility (HY) -31200 + (ID) 4850
Total energy: -464504.0 ( -186.17 by residue)
QMean score : 0.413
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