Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKA---DNGGAQTHLIQLANHFCV-HHDVYVIVGN-HGPMIEQ---LD---------------ARVNVIILEHLVG--------PID--FKQD----ILAVKVLAQLFS-KIKPDVIHLHSSKAGTVGRIAKFISKSKDTRVVFTAHGWAFTEGVKP------AKK---FLYLVIEKLMSCITDSIICVSDFDKQLALKY-RFNRLKLTTIHNGIADVPAVKQTLKS---QSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAY-PKLPQNLIAAIEILKLHNS-NHAHFTFIGDGPTLNDCQQQVVQAGL-ENDVTF-LGNVINA--SHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVAD-NGICMMNNQPETIAKVLEKYLID-SDY-IKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 3FRO Chain:A ((3-432)) | MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFK---IPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLL--------SK--FG-MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE--LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSID- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244667 for 2986 contacts (-81.9/contact) +
2D Compatibility (PS) -40242 + (NN) -13573 + (LL) 600
1D Compatibility (HY) -12800 + (ID) 4100
Total energy: -314782.0 ( -105.42 by residue)
QMean score : 0.498
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