Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSDSLKENIIYQGLYQLIRTMTPLITIPIISRAFGPSGVGIVSFSFNIVQYFLMI-AS--VGVQLYFNRVIAKSVNDKRQLSQQFWDIFVSKLFLALTVFAM-YMVVI-TIF----IDD---Y-YL-IFLLQGIYI-IGAALDISWFYAGTEKFKIPSLSNIVASGIVLSVVVIFVK-DQSDLSLYVFTIAIVTVLNQLPLFI-YL-KRYI-SF-----VSVNWIHVWQLFRSSLAYLLPNGQLNLYTSISCVVLGLVGTYQQVGIFSNAFNILTVAIIMINTFDLVMIPRITKMSIQ-QSHSLTKTLANNMNIQLILTIPMVFGLIAIMPSFYLWFFGEEFAS-----TVPLMTILAILVLIIPLNMLISRQYLLIVNKIRLYNASITI-GAVMNLVLCLVLIY--FYGIYGAAIARLITEFILLIWRFVDITKINVKLNIVSTIQCVIAAVMMFIVLGVVNHYLPPTMYATLLLIAIGIVVYLLLMMTMKNQYVWQILRHLRHKTI |
| 3W4T Chain:A ((17-446)) | --KKAIVRLSIAMMIGMSVQTLYNLADGIW-VSGLGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDK--EGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLFIAYWLFVKRDTYVDITLRDFSPSREILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGGENGVAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTY-----VIKGDLISALRTLPVFLVLTPFGMMTS-AMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRM------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3W4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -423098 for 3336 contacts (-126.8/contact) +
2D Compatibility (PS) -39330 + (NN) -240 + (LL) 9624
1D Compatibility (HY) -15600 + (ID) 2800
Total energy: -471444.0 ( -141.32 by residue)
QMean score : 0.259
|
|
|