Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYTLNQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAGNRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHRDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYKMPVIYSTHPRSWKKIE--ESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSGTLSEESSILKFPGVLIRTSTERPEVLDKGTVIVGGITYNNLIQSVELAREMQNNNEPMIDAI-DYKDTN-VSTKVVKIIQSYKDIINRNTWRK |
| 4HWG Chain:A ((10-384)) | ---LKVMTIVGTRPELIKLCCVISEFDKHTKHILVHTGQNYAYELNQVFFD-MGIRKPDYFLEVAADNTAKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSHRE-----KNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPALNIREAHERPEGMDAGTLIMSGFKAERVLQAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVDYINRTVWFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160124 for 3125 contacts (-51.2/contact) +
2D Compatibility (PS) -38613 + (NN) -11776 + (LL) 372
1D Compatibility (HY) -37200 + (ID) 9300
Total energy: -256641.0 ( -82.13 by residue)
QMean score : 0.454
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