Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQ----DPRVLKQIETIKGVTNDYKIVGMNNSQATN---RRLENLDCNYRLLGSKV---DPKNILSKLIKRIRFATGVIRE--IKAFKPDVIHANDFDVLLMVYLSNYK-KANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYK--KEANVITNAPILNDSREF--------KEIENFKEIVYQGQIVMDRGYEEFIIASSAFKQ----NAPSFIIRGFGPHEEVIKELIS--YNSENIRLDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF |
| 3C48 Chain:A ((21-423)) | MRVAMISMHTSPLQQGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRV-INIAAGPYEGLSKEELPTQLA---AFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSY--DTPESEARRICEQQLVD-NADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGTERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS--DTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVP------SFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153115 for 2987 contacts (-51.3/contact) +
2D Compatibility (PS) -37748 + (NN) -11181 + (LL) 940
1D Compatibility (HY) -4800 + (ID) 2750
Total energy: -208654.0 ( -69.85 by residue)
QMean score : 0.458
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