Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSILTIYTIITITS-VVLG--NTLN--NIRLINMNLYKSNHYYWKFVSILLISILIESIA-LIIVF---LYFFN----LN---T-IDI-IFLILLNILMCLRIYLNVFFRMTLKYNQILYIALIQFLGLLIGLFLY---YLIQNWIV--CFITSELFATIY--T--LVKLRGL-----TIGE-YQSEDNNVVKDYVMLLSTNSLNNLNLYLDRLILLPIIGGTAVTISFLSTFIGKMLATFLYPINNVVLSYISVNESD----NIKKQYLKTNLFAIAALCLVMIICYPITLIIVSLLYNIDSSL-----YSKFIILGNIGVLFNAVSIMIQTLNTKHASITLQANYMTL-HTITFIFITILMTI--AFGLNGFFWTTLFSNIIKYVILNIIGLKSKFINKKDVD |
| 3W4T Chain:A ((17-452)) | --KKAIVRLSIAMMIGMSV-QTLYNLADGIW-VSGLGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKE--GADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLFIAYWLFVKRDTYVDITLRDFSPSREILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGGENGVAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTY-----VIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRMRISALK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -368657 for 3192 contacts (-115.5/contact) +
2D Compatibility (PS) -38832 + (NN) -6734 + (LL) 1052
1D Compatibility (HY) -12800 + (ID) 1900
Total energy: -427871.0 ( -134.04 by residue)
QMean score : 0.299
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