Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPE--YVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINI--PKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYND--TFKAY-REQYDKILLYSGNMGQLQDMETLISFLKLNKD-Q--PQTLTILCGHGKKFADVKTAIEDHRI-ENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTH--SSKELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 3C48 Chain:A ((19-423)) | -SHMRVAMISMHTSPLQQ--GMNVYILSTATELAKQGIEVDIYTRATRPSQ-G-EI--VRVAENLRVINIAAGPYEGLS-KEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSG--QVGWLLRDLWRIPLIHTAHTLAAVKNSY------DTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDA-DPDRISVVSPGADVELYSPG----TERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS--DTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLV----AMEAQASGTPVIAAR--VGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHA-RTFSWAATAAQLSSLYN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -270564 for 3175 contacts (-85.2/contact) +
2D Compatibility (PS) -39347 + (NN) -8275 + (LL) 1364
1D Compatibility (HY) -6400 + (ID) 2750
Total energy: -325972.0 ( -102.67 by residue)
QMean score : 0.471
|
|
|