Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQLW------------------KSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISD--SFKVAIVRPPMIYGAHCPGN--FQRLMQLS-K--RLPIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIP-GKM-SLVIADIMDETTTKDKA |
| 3VPS Chain:A ((7-301)) | -KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASHKSVPRSFKQP-LDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADT----LPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPSVVNFGSGQSLSVNDVIRILQATSPAAEVARKQP----R----------PNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEW------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VPS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105873 for 2248 contacts (-47.1/contact) +
2D Compatibility (PS) -28277 + (NN) -5885 + (LL) 1692
1D Compatibility (HY) -3600 + (ID) 2500
Total energy: -144443.0 ( -64.25 by residue)
QMean score : 0.427
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