Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDRFYNWLINQKIYKEYV--ENFYL----HRGYTLQQKIKILISLYIVI-GFSIYMVDVLAVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE
4U66 Chain:A ((118-184))
---------------------------------------------------EKIYTEIVPLENFYLAEGYHQKYYLQNTTKLYQTLKAIYGGFGNLVRSTLAARMNGYIAGNLSIASL----------------
General information:
TITO was launched using:
RESULT:
Template:
4U66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46727 for 318 contacts (-146.9/contact) +
2D Compatibility (PS) -6037 + (NN) 1677 + (LL) 6008
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -50279.0 ( -158.11 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_4U66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U66-query.scw
PDB file :
Tito_Scwrl_4U66.pdb
: