Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWL-YNAIEPLFQLIRPISPIAWAPFVVLWFG-------------IGSLPAIAIIFIAAFFPIVFNTIKGV-RDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSW-IFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE |
2ONK Chain:C ((24-275)) | ----MRLLFSALLALLSSIILLFVLLPVAATVTLQLFN-----FDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ONK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -273459 for 1711 contacts (-159.8/contact) +
2D Compatibility (PS) -23619 + (NN) 55 + (LL) 1196
1D Compatibility (HY) -16000 + (ID) 1600
Total energy: -313427.0 ( -183.18 by residue)
QMean score : 0.365
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