Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQRLLTM-IDGKS--IFESARILRDK--LPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTG---LFRYIQMFIISNGVETRYFSNNDSELLKSHMFY--WSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMAMRPYQVYAVEALIQQ--ATETGNN-------GYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVLGFSVDYINTFKN-KALKAE-DNSMVEAIDTEEVWLADKRVELVTRHIINN-----HDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLE------QPLTIAGIFTFKPNEDDRD-GEVP----------YHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEY------------KKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYR--LLAKIILR-------LKAFDEFEFTIDEIGMDEQENE-----------------------DYKSKYLAVYDQVKRATAEKNKVSILNDID---FEIEMMRNDTINVNYIMNILRQIDLEDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARKAIESFVAETTEKYGV |
| 4BEC Chain:A ((29-885)) | -SYQSESDLERELIQDLRNQGYEFISVKSQSAMLANVREQLQ-----NLNGVVFNDSEWRRFTEQYLDNPSDGILDKTRKIHIDYICDFIFDDERLENIYLIDKKNLMRNKVQIIQQ---------RYDVTILVNGLPLVQIELKKRGVAIREAFNQIHRYSKESFNSENSLFKYLQLFVISNGTDTRYFANTTKRDANSFDFTMNWAKSDNTLIKDLKDFTATCFQKHTLLNVLVNYSVF-DSSQTLLVMRPYQIAATERILWKIKSSFTAKNWSKPESGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNGSENTAGLKRNLDKDDNKIIVTTIQKLNNLMKAESDL--PVYNQQVVFIFDECHRSQFGEAQKNLKKKFKRYYQFGFTGTPIFPENA-LGSETTASVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKSLETETDEKKLSAAENQQAFLHPMRIQEITQYILNNFRQKTHRTFPGSKGFNAMLAVSSVDAAKAYYATFKRLQEEAANKSATYKPLRIATIFSFA-------IGEISDETFDTSAMDSSAKEFLDAAIREYNSHFKTNFSTDSNG--FQNYYRDLAQRVKNQDIDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSRTNRIYDATKTFGNIVTFRDLERSTIDAITLFGDKNTKNVVLEKSYTEYMEGFTDAATGEAKRGFMTVVSELEQRFPDP---TSIESEKEKKDFVKLFGEYLRAENILQNYDEFATLKALQQIDLS-DPVAVEKFKAEHYVDDEKFAELQTIRLPADRKIQDYRSAYNDIRDWQRR-------------WDDVVFEVDLLKS-------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252894 for 5985 contacts (-42.3/contact) +
2D Compatibility (PS) -80273 + (NN) -33249 + (LL) 13164
1D Compatibility (HY) -66800 + (ID) 15750
Total energy: -435802.0 ( -72.82 by residue)
QMean score : 0.478
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