Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLS------VDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ |
1N13 Chain:A ((7-52)) | -----------------------PLHAYFKLPNTVSLVAGSSEGETPLNAFDGALLNAGIGNVNLIRIS---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N13.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3132 for 149 contacts (-21.0/contact) +
2D Compatibility (PS) -4268 + (NN) -156 + (LL) 15840
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 6584.0 ( 44.19 by residue)
QMean score : 0.341
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