Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MGKPLFKKGDSMNNSIFYTYLKFNLRYFIRRKFEIVKRSRLNVTTKILFLIKLIFSSLLLFISTIMLADYFSDYIDFIEYYFYASMFIYIVFIPLIPRTKLLINPM----DKQLLYRSSLREVDIFNLIYA---SDVLKKFVGYFNLLIVGMAISLYHISPFIFNLKVFCALIYF-STISYVIQIIFINIKVISTKKLFSYHYCVFNFMMGSIVSVIGFVVSFLLVNLLIKPFLVFSTYVIKSKKTFEWYSYFQDIKNEVIIINEK--VMQLLDYISPHT----IFMRLNFVNISFVIITIALFIALYYFNKIGFWYRKEDIYLSSTNINFSLPISIKAITTIQLKHWISNKEEVNLHKPFFYISYSIWFFLGCLIYFSQMAYNQLANAVIFILILNTITRDSFSAGTDFFTKSLRFDSDRKSIGLYRMSNTDFKQIYDSKLSLIRFIGFKETILAIILLAIFLNQDIYLYIIGFEIIIINTVIIPNLSLLPSYLSPH---FNHQHYSELESFEEQIFLEDTVFDKVKNFLSSSYFLILFVGYLSQR--NYIDIMIFIIIFNILALIL--------VSLFIRFSKQKITKSWRKRDLYL-------------- |
| 4XDN Chain:A ((24-640)) | GDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTLSVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHDLPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTSFHGLLSQCREKSQWKWFLNLCYVNYLLNER---FPIPEDALQELRSTELHTVGPELYAWKLALEMVIQLCKDGNI--TDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKELKNILLLLQSVSYIVNCY--DEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSI-LEFCEFYKVWEQTLLKGAVVLGPSPGYVRLLQAMKVQF--------EGGGAVEEYTRLAQ--SGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNPIWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVNRFK--LKKALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAMRGKDVALTNAKLEALVKQITS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -454659 for 4174 contacts (-108.9/contact) +
2D Compatibility (PS) -55933 + (NN) 2312 + (LL) 1456
1D Compatibility (HY) -20800 + (ID) 4100
Total energy: -531724.0 ( -127.39 by residue)
QMean score : 0.226
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