Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITPLVDTG---NEQRQDLEKVEKAINQ |
| 1UQW Chain:A ((23-337)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAKDVVVAV-GSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLK--NVLAESYTVSDDGITYTVKLREGIKFQ---------DGTDFNAAAVKANLDRASDPANHLKR--HNLYKNIAKTEAID-------------------------------------------PT-TVKITLKQPFSAFINILAHPATAMISPAALEKYGK----------------EIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQP-----GLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQ-KPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50000 for 2261 contacts (-22.1/contact) +
2D Compatibility (PS) -32814 + (NN) -13068 + (LL) 14536
1D Compatibility (HY) -11600 + (ID) 3200
Total energy: -96146.0 ( -42.52 by residue)
QMean score : 0.423
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