Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKKKNILKAIGIYSFIAMMFVIILYPLLWTFGISLNPGTNLYGAKMIPDNATFKNYAFLLFDDSSQ-----------YLTWYKNTLIVASANALFSVIFVTLTAYAFSRYRFVGRKYGLITFLILQMFPVLMAMVAIYILLNTIGL------LDSLFGLTLVYIGGSIPMNAFLVKGYFDTIPKELDESAKIDGAGHMRIFLQIMLPLAKPILAVVALFNFMGPFMDFILPKILLRSPEKFTLAVGLFNFINDKYANNFTV--FAAGAIMIAVPIAIVFLFLQRYLVSGLTTGATKG |
4KI0 Chain:G ((27-296)) | -----------------------IMFPLLMVVAISLRQG-NFATGSLIPEQISWDHWKLALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGG-IALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQ---NYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204952 for 1775 contacts (-115.5/contact) +
2D Compatibility (PS) -25744 + (NN) -7147 + (LL) 2864
1D Compatibility (HY) -30400 + (ID) 5100
Total energy: -270479.0 ( -152.38 by residue)
QMean score : 0.324
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