Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYD--DYKALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKKLTIGYQNRFRPDSQF---LHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLNEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGSWNPDEFTVEDSAFGFIKMKNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKP-EQAMVVTKILEAIYQSAKSGKAIYFE |
| 1OFG Chain:A ((36-369)) | -------IVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQND-PAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGE-EPIEVRAYTYSDPNDER------------FVEVEDRIIWQMRFRSGAL----SHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLA--EAVINN-KPVRSPGEEGMQDVRLIQAIYEAARTGRPV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46997 for 2738 contacts (-17.2/contact) +
2D Compatibility (PS) -35023 + (NN) -13571 + (LL) 2560
1D Compatibility (HY) -14800 + (ID) 5000
Total energy: -112831.0 ( -41.21 by residue)
QMean score : 0.397
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