Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAYKPYRHQLRRSLFASTIFPVFLVIIIGLVSFYAIYIWIEHRTIHQHVDESQSSLHHTEKQIQTFITQHNNSFQELDLTNHHDVTATKRELLKLIHQQPATLYYELSGPNQFITNNYEHLNTKNMYLFSTHQLKFNNSTYMLKIYMANTPRLSEIKKDSRQFALIVDQYDNILYANDDRFTIGEKYRPQQFGFMNESVKLNHADHRLIIYKDIHENIEDGITLLIVMAVVLVLLVIFGFISADNMAKRQTKDIETIIQKIYYAKNRHLGTYTPLK-NNSELEEINNYIYDLFESNEQLIHSIEHTERRLRDIQLKEIERQFQPHFLFNTMQTIQYLITLSPKLAQTVVQQLSQMLRYSLRTNSHTVELNEELNYIEQYVAIQNIRFDDMIKLHIESSEEARHQTIGKMMLQPLIENAIKHGRDTESLDITIRLTLARQNLHVLVCDNGIGMSSSRLQYVRQSLNNDVFDTKHLGLNHLHNKAMIQYGSHARLHIFSKRNQGTLICYKIPLSRGNVDV |
4I5S Chain:A ((37-432)) | NNNQVKQLNAKVRSLITG--------------------------------HYTDKLKVEDNSDLSELVNNVNDLSEVFRLTHENLAQEKNRLTSILSYMTDGVLATDRSGKITVINDMAQKQLNVT------------------REQALECNILDILDDDSYTYNDLIT--------KTPEIVLTRRDEYDEFITLRIRFALNRRESGFI----------SGLIAVLHD---------------------ATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALT------------ESVAPSFIKVSLDETNRM---------MRMITDLLSLSRSHLDVELTNFTAFMNYILDRFDQIQSQQSTEIIRDYPDKSVWIEID---------------TDKMTQVIDNILNNAIKYSPD--GGKVTITMQTTDTQLILSISDQGLGIPKKDLPLIFDRF-YRVDKARGLGLAIAKEIVKQHKG---FIWANSEEGEGSTFTIVLP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35027 for 2676 contacts (-13.1/contact) +
2D Compatibility (PS) -39605 + (NN) -2764 + (LL) 12916
1D Compatibility (HY) -6400 + (ID) 3050
Total energy: -73930.0 ( -27.63 by residue)
QMean score : 0.241
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