Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYLTSQGVKKGDVIGIFAPNDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKLLFYAEKHLSSLTDI--DQNLLHMDIDVA-----QYDEIVNPDYHQPFQATPVEPQDLAALIYTSGTTGSPKGVMFSYESFVH------NGANLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGGTLILQRYFNGEELNDMIAQYHPTFIIMIPTMYYSTLRASNFNPENFRAMDYIIQGGSQPLP----SIQAAFKQYGINIINGYGLTEAPLVLVNTPENSKR----KPMSIGKAVMFVDARILD-DNGEEVPTGEIGELAIKAKNVTPGYWNKPAETAKAFHGR-YLLTGDLAKMDDDGDIFIIDRKKELIITGGENVLPSEVENALAEHPLVDRCVVVGYDHPKYGESIAAAIILREDEPHYAEILDQHMRSRLAGYKVPRMYVPVTHMPLNSTQKPDKLAIRQMMNDKVSQTL |
| 3A9U Chain:A ((38-534)) | ---------------KPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARE-DVKVMCVDSAPDGCLHFSELTQADENEAPQVD-ISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLY--FHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKS-------ELEDTVRAKFPQARLG--QGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEIKQYISKQVIFYKRIKRVFFIEAIP----KAPSGKILRKNLKEKLA--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -316981 for 3909 contacts (-81.1/contact) +
2D Compatibility (PS) -50152 + (NN) -23176 + (LL) 1216
1D Compatibility (HY) -26800 + (ID) 6600
Total energy: -422493.0 ( -108.08 by residue)
QMean score : 0.558
|
|
|